Protein Information

Protein ZmABI8
ZmABI8 is a protein in the ABI3-VP1 family.
Information
TF Name:	ZmABI8
Species:	Maize
TF Family:	ABI3-VP1
Gene Name(Synonym):	ABI8
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

Overview of domains present in v5 transcripts
	PF02362
Zm00001eb001550_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d027409	DAPseq	sequence	fimo	position
Zm00001d027409	DAPseq	sequence	fimo	position
Zm00001d027409	ChIPseq	sequence	fimo	position
Zm00001d027409	PChIPseq	sequence	fimo	position

Zm00001eb001550_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MEFTAPPPATRSGGGEERAAAEHHQQQQQATVEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDAAANDKGLLLSFE
DRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDPPVVHHQYHHHRLPLP
SAVVPYAPWAAAAHAHHHHYPAAGVGAARTTTTTTTTVLHHLPPSPSPLYLDTRRRHVGYDAYGAGTRQLLFYRPHQQPS
TTVMLDSVPVRLPPTPGQHAEPPPPAVASSASKRVRLFGVNLDCAAAAGSEEENVGGWRTSAPPTQQASSSSSYSSGKAR
CSLNLDL

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF02362
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Nucleotide Sequence
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TCTCCTCTCACGCTCTCTCTCTCTC...

TCTCCTCTCACGCTCTCTCTCTCTCCGCCCCATGGATGACGGATACTCCTACAATACAAGTTGTAGTAGTAGTAGTAGGGGTACTGCATACCTACACAGTGACAGGGAGATGGAGGTCGATCCCAAGCATCCATACATCACATGATACATGCACACACATGCTTAGCTGCAAAACTGCAACAGTTATTAACAACACTACTACAGTGGGTGAGACTGATTAGGTAATATAAGTACTAGCTACTAGCTAGGAAAGGAGGAGGCCAATTCAATTACCTTTGGTTGCAAGCCAAAAAGTAAGTATCCATCTCCTTTCCCTTGTCCCACCAATGCACAAGAACCTTCATAGTACTGCTACTGCTACCACACTCATCACATCTCCTGCTACTCTTCTTACCCAGCCACTGCTCCTCCTCCTCCTTCTTCTTCTTCCTCCTCCGATCCCCTAGCTTGATTTGAGCCTGCAGGTCGCTAGCACACCTCCTCCCTTCCGTCCTCATCAATCCATCCCGCGCGCGGGCCGCGTAGCAACCACAGATCCGCAATAACAATCCAAGAAATTAAACCAAGCTGAACCAAACCCTGAAAATTCCCCAATTCTAAATTCTCCCGATCCGAAGCCATCCGCTAATACAAAAAACAATCCCCAAAGTCGTATAACTAACTATGGTAACAGCTGCACCTCCACTCTTCGCCATCCAGTAGTAGCGTGCCATAAACAAAAAGTATATCAGGCGCCACTGGTCAAAGTAAAGTCTCAAGGCGGAGGCGGTAGCGGCAGCAGCGTCGATCGATCGGCCGGCGTCTACGGCCTACGTTCGACCTGCCTCGACGGACGGCCGGCCGGCTCGATCTCGACCGATCGCCGGTCGTCGATCGGAGAGATCGATGGAGTTCACCGCTCCCCCGCCCGCGACCCGGTCGGGCGGCGGCGAGGAGAGGGCGGCTGCTGAGCACCACCAGCAGCAGCAGCAGGCGACGGTGGAGAAGGAGCACATGTTCGACAAGGTGGTGACGCCGAGCGACGTCGGGAAGCTGAACCGGCTGGTGATCCCGAAGCAGCACGCGGAGAGGTACTTCCCGCTGGACGCGGCGGCGAACGACAAGGGCCTGCTGCTCAGCTTCGAGGACCGCGCGGGGAAGCCCTGGCGCTTCCGCTACTCCTACTGGAACAGCAGCCAGAGCTACGTGATGACCAAGGGCTGGAGCCGCTTCGTCAAGGAGAAGCGCCTCGACGCCGGGGACACCGTCTCCTTCGGCCGCGGCGTCGGCGAGGCGGCGCGCGGCAGGCTCTTCATCGACTGGCGGCGCCGACCCGACCCGCCCGTCGTGCACCACCAGTACCACCACCACCGCCTCCCTCTCCCCTCCGCCGTCGTCCCCTACGCGCCGTGGGCGGCGGCGGCGCACGCGCACCACCACCACTACCCAGCAGCTGGGGTCGGTGCCGCCAGGACGACGACGACGACGACGACGACGGTGCTCCACCACCTGCCGCCCTCGCCCTCCCCGCTCTACCTTGACACCCGCCGCCGCCACGTCGGCTACGACGCCTACGGGGCCGGCACCAGGCAACTTCTCTTCTACAGGCCGCACCAGCAGCCCTCCACGACGGTGATGCTGGACTCCGTGCCGGTACGGTTACCGCCAACGCCAGGGCAGCACGCCGAGCCGCCGCCCCCCGCCGTGGCGTCGTCAGCCTCGAAGCGGGTGCGCCTGTTCGGGGTGAACCTCGACTGCGCCGCCGCCGCCGGCTCAGAGGAGGAGAACGTCGGCGGGTGGAGGACTAGTGCGCCGCCGACGCAGCAGGCGTCCTCCTCCTCATCCTACTCTTCCGGGAAAGCGAGGTGCTCCTTGAACCTTGACTTGTGAAGGCATGGCAGCCGGAGAAGCCGCGTGGTCGTCGTTCTCCTACTCCGTACTCGTACGATCTATCTCTACAGCAGCAGCCTACTACTACTACTACTTGCTCCCCGGCCGGCGGCCGCTTCTGGCGCCACTGCAGTGCACTGAAGACGGCACCAACGGTCGTCGTCGTGGAGAGTGAGGGGATCGAGATCCAATCCAGTCCAAGTAAACAAAGGCGGCGGCGGCGGTACGTGGCCGGCCGGTGCAAGTAAGGATCGATCGAGCTGGAGTGGAGGAGCACTGCGCTGCGCTGCACCAACAAGTCTTCACTCGTAACCCGTATATAGCTCATCTCTCCCAATTTCTTTTTAGCAATTCCGGTGTGAAGGGGGAAACAAGGAAATTAAGAACAAAGCAGCAGCAACAAGTTATAAAAAAATGATTTCTTCTTCTCGATGGTTAATTTGTCGCCTCGATTTGCCTTTCTTGATTTCCTCGTCTGCTCGAATTCTTCTTTTTGTTCCGCCTCCTGGAGGGGAGACCCTACTGATTTCTTGCATTTCTGAAAGATAATAGCGCCTTGTTTGAGCATGCAAGACCAGGGGCCTAGGAAACACTGTGTGTGTGTGTGCTCTCTCCGATCCCCACATATGATAACAATTGCTAATATGCACAGCATGATCATGTCAGTAGTGAGGGGGTTCTCCTAGTTGTGAGGATCGGATGAGAGGGCCGGGGGCGACAAGTGTGCTTTATTGTACTGCATGCATGTATTGTGCGCATGGATTGTTCTTGCTGCGGTGCTTTGGGCAGGCTCTCCTTCCAAAACACCTCGGCTGTAGTGAGGAGAGGGGATCAAGCAGGTGCCTTTAAAATGTGGGAGCTCCTCAGCAGCAGCC

GRMZM2G082227_T01 from maize genome v3

Related TFome: pUT3977

Amino Acid Sequence
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MEFTAPPPATRSGGGEERAAAEHHQQQQQATVEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDAAANDKGLLLSFE
DRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDPPVVHHQYHHHRLPLP
SAVVPYAPWAAAAHAHHHHYPAAGVGAARTTTTTTTTVLHHLPPSPSPLYLDTRRRHVGYDAYGAGTRQLLFYRPHQQPS
TTVMLDSVPVRLPPTPGQHAEPPPPAVASSASKRVRLFGVNLDCAAAAGSEEENVGGWRTSAPPTQQASSSSSYSSGKAR
CSLNLDL

Nucleotide Sequence
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AGCTGCACCTCCACTCTTCGCCATC...

Zm00001d027409_T001 from maize genome v4

Amino Acid Sequence
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MEFTAPPPATRSGGGEERAAAEHHQQQQQATVEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDAAANDKGLLLSFE
DRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDPPVVHHQYHHHRLPLP
SAVVPYAPWAAAAHAHHHHYPAAGVGAARTTTTTTTTVLHHLPPSPSPLYLDTRRRHVGYDAYGAGTRQLLFYRPHQQPS
TTVMLDSVPVRLPPTPGQHAEPPPPAVASSASKRVRLFGVNLDCAAAAGSEEENVGGWRTSAPPTQQASSSSSYSSGKAR
CSLNLDL

Nucleotide Sequence
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ATGGAGTTCACCGCTCCCCCGCCCG...

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Protein ZmABI8

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmABI8 is the regulator

Interactions where ZmABI8 is the target
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Zm00001eb001550_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G082227_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d027409_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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